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Table 1 Execution times of MOLA using 1 (serial), 2, 6 and 10 processors (parallel).

From: MOLA: a bootable, self-configuring system for virtual screening using AutoDock4/Vina on computer clusters

    Execution time (minutes)
PDB code Receptor-Ligand Complex   Serial Parallel
    1 2 6 10
1RBP Retinol binding protein-retinol Vina 1110 593 216 132
   AutoDock4 2650 1385 499 310
1HVR HIV-1 protease-XK263 Vina 1034 536 195 120
   AutoDock4 2646 1366 484 306
3PTB Trypsin-benzamidine Vina 1108 583 211 129
   AutoDock4 2627 1367 495 302
1STP Streptavidine-biotin Vina 1025 535 193 119
   AutoDock4 2646 1369 493 305