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Table 1 List of default display type (engine) plugins

From: Avogadro: an advanced semantic chemical editor, visualization, and analysis platform

Name

Description

Axes

Renders x, y, z Cartesian axes from the origin

Ball and Stick

Standard ball and stick representation

Cartoon

Secondary biological structure (αhelix and βsheet)

Dipole

Render direction/magnitude of dipole

 

moment if present

Force

Renders arrows showing forces on atoms from

 

force field

Hydrogen Bond

Renders hydrogen bonds as dotted lines

Label

Shows labels on atoms and bonds, configurable

Overlay

Overlay of color gradient used for electrostatic

 

properties

Polygon

Renders closed polygons of metallic centers

Ribbon

Basic secondary structure ribbon rendering

Ring

Renders rings in structure, different colors

 

depending on ring size

Simple Wireframe

Very simple wireframe display

Sticks

Stick or liquorice rendering style for atoms

 

and bonds

Surface

Renders triangular isosurface meshes

Van der Waals

Van der Waals sphere rendering (no bonds,

Spheres

space-filling)

Wireframe

Wireframe with more features such as bond order

 

rendering