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Table 3 Performance of SMILES parsing

From: chemf: A purely functional chemistry toolkit

Run Singlethreaded Multithreaded Multithreaded
    (after profiling)
1 17’149 10’295 7608
2 15’659 7123 5488
3 15’663 7248 5433
4 15’880 7508 5425
5 15’809 7669 5534
6 15’720 7197 5471
7 15’665 7174 5448
8 15’390 7296 5513
9 15’423 7687 5696
10 15’523 7564 5491
average 15’788 7676 5711
  1. Time (in milliseconds) taken to parse part of the ZINC database containing about 350’000 structures on a quadcore laptop. The multi-threaded runs ran on all four cores without further optimization of Scala’s parallel collections settings.
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