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Table 2 External databases used for data integration

From: Dragon exploration system on marine sponge compounds interactions

Database URL Number of records
Chemical Entities of Biological Interest (ChEBI) http://www.ebi.ac.uk/chebi/init.do 38,580
ChEBI Ontology http://www.ebi.ac.uk/chebi/ 29,974
Enzyme http://ca.expasy.org/enzyme/ 5,418
Gene http://www.ncbi.nlm.nih.gov/gene 892,7911
Functional association data/networks (GeneMania) http://genemania.org/ 21,084
GO http://www.geneontology.org/ 34,940
GOA http://www.ebi.ac.uk/GOA/ 11,300,749
HUGO Gene Nomenclature http://www.genenames.org/ 35,795
Human Major Histocompatibility Complex http://www.ebi.ac.uk/imgt/hla/ 6,939
Immunoglobulins and T cell receptors nucleotide sequences http://www.imgt.org/IMGTlect/ 156,529
Interpro http://www.ebi.ac.uk/interpro/ 21,749
Oxford Human Mouse grid http://www.informatics.jax.org/ 17,834
Pfam-A http://pfam.sanger.ac.uk/ 12,273
Pfam-B http://pfam.sanger.ac.uk/ 233,174
Pfam-Seed http://pfam.sanger.ac.uk/ 12,273
PRINTS http://bioinf.man.ac.uk/dbbrowser/PRINTS/ 2,050
Prosite http://www.expasy.org/prosite/ 2,247
Prosite Documentation http://www.expasy.org/prosite/ 1,621
REBASE http://rebase.neb.com/rebase/rebase.html 5,020
RefSeq http://www.ncbi.nlm.nih.gov/RefSeq/ 18,236,994
UniProtKB/Swiss-Prot http://www.uniprot.org/ 53,1473
Taxonomy http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Taxonomy 817,120
UniProtKB/TrEMBL http://www.uniprot.org/ 16,504,022
Unigene http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=unigene 2,652,777
Uniprot: UniProtKB/Swiss-Prot, UniProtKB/TrEMBL http://www.uniprot.org/ 17,035,495
  Total Records 76,644,041