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Table 6 Comparison of the quality criteria and statistical criteria for the training set, test set and complete set for some selected charge calculation approaches

From: Predicting pK a values from EEM atomic charges

5d EEM QSPR model employing Svob2007_chal2 EEM parameters:

Complete set:

       

R 2

RMSE

s

F

Number of molecules

   

0.920

0.629

0.647

269

74

   

Cross-validation:

Cross-

Training set

Test set

validation

    

Number of

    

Number of

step

R 2

RMSE

s

F

molecules

R 2

RMSE

s

F

molecules

1

0.9283

0.5211

0.5498

137

59

0.9202

1.0754

1.3884

21

15

2

0.9210

0.6538

0.6899

124

59

0.9029

0.5394

0.6963

17

15

3

0.9191

0.6442

0.6796

120

59

0.9275

0.5823

0.7517

23

15

4

0.9207

0.6244

0.6588

123

59

0.9271

0.6878

0.8880

23

15

5

0.9274

0.6302

0.6643

138

60

0.9008

0.6678

0.8834

15

14

5d EEM QSPR model employing Ouy2009_elemF EEM parameters:

Complete set:

       

R 2

RMSE

s

F

Number of molecules

   

0.8866

0.7501

0.7825

106

74

   

Cross-validation:

Cross-

Training set

Test set

validation

    

Number of

    

Number of

step

R 2

RMSE

s

F

molecules

R 2

RMSE

s

F

molecules

1

0.8936

0.6349

0.6698

89

59

0.8704

1.2857

1.6598

12

15

2

0.8953

0.7526

0.7940

91

59

0.8018

0.7802

1.0072

7

15

3

0.8908

0.7481

0.7893

86

59

0.8647

0.7983

1.0306

12

15

4

0.8821

0.7614

0.8033

79

59

0.9154

0.7481

0.9658

19

15

5

0.8956

0.7557

0.7966

93

60

0.8089

0.8396

1.1107

7

14