Table 7 Completeness of manually curated links
From: On InChI and evaluating the quality of cross-reference links
Links between the same entities | Links between compatible entities | |||||
|---|---|---|---|---|---|---|
Type of links | Automatically generated | Manually curated | Completeness | Automatically generated | Manually curated | Completeness |
HMDB → PDBeChem | 1251 | 1173 | 93.8% | 1613 | 1177 | 73.0% |
HMDB → DrugBank | 1771 | 1436 | 81.1% | 1900 | 1467 | 77.2% |
HMDB → ChEBI | 3634 | 3211 | 88.4% | 4584 | 3464 | 75.6% |
ChEBI → PDBeChem | 2773 | 1737 | 62.6% | 2961 | 1765 | 59.6% |
ChEBI → DrugBank | 1989 | 1561 | 78.5% | 2078 | 1662 | 80.0% |
ChEBI → HMDB | 3634 | 535 | 14.7% | 4584 | 646 | 14.1% |
DrugBank → PDBeChem | 3938 | 3669 | 93.2% | 4073 | 3747 | 92.0% |
DrugBank → ChEBI | 1989 | 1408 | 70.8% | 2078 | 1464 | 70.5% |
NPC → DrugBank | 1299 | 1021 | 78.6% | 1480 | 1155 | 78.0% |
ChEBI → DrugBank | 1989 | 1563 | 78.6% | 2078 | 1665 | 80.1% |
ChEBI → HMDB | 3634 | 3322 | 91.4% | 4584 | 3653 | 79.7% |