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Table 1 Quantified overall performance of the three mapping applications

From: Comparative evaluation of open source software for mapping between metabolite identifiers in metabolic network reconstructions: application to Recon 2

  Mean counts  
  In Hits Out Matches Mean score
MetMask 99 98 146 93 0.63
CTS 99 80 105 75 0.57
UniChem 99 74 77 72 0.70
  1. Scores were calculated as described in Section Scoring. Means were taken over all input-output pairs that were covered by each application. The means reflect well general characteristics of each application observed in individual tests (see Additional file 1: Table S1).