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Table 1 Quantified overall performance of the three mapping applications

From: Comparative evaluation of open source software for mapping between metabolite identifiers in metabolic network reconstructions: application to Recon 2

 

Mean counts

 
 

In

Hits

Out

Matches

Mean score

MetMask

99

98

146

93

0.63

CTS

99

80

105

75

0.57

UniChem

99

74

77

72

0.70

  1. Scores were calculated as described in Section Scoring. Means were taken over all input-output pairs that were covered by each application. The means reflect well general characteristics of each application observed in individual tests (see Additional file 1: Table S1).
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Journal of Cheminformatics

ISSN: 1758-2946

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