Table 5 F-score of terminological resources for different case sensitivity matching.
From: Recognition of chemical entities: combining dictionary-based and grammar-based approaches
| Â | Insensitive | Sensitive | Partial sensitive | ||||||
|---|---|---|---|---|---|---|---|---|---|
Resource | P | R | F | P | R | F | P | R | F |
ChEBI | 71.2 | 33.5 | 45.6 | 77.7 | 39.7 | 52.6 | 76.7 | 40.2 | 52.7 |
ChEMBL | 91.6 | 18.9 | 31.3 | 88.8 | 18.7 | 30.9 | 88.5 | 18.8 | 31.1 |
ChemSpider | 78.4 | 40.5 | 53.4 | 80.4 | 38.4 | 51.9 | 80.3 | 39.6 | 53.0 |
DrugBank | 76.0 | 17.5 | 28.4 | 78.1 | 17.1 | 28.1 | 78.4 | 17.5 | 28.6 |
HMDB | 79.3 | 35.1 | 48.6 | 81.3 | 33.9 | 47.9 | 81.5 | 35.1 | 49.1 |
NPC | 58.5 | 26.8 | 36.8 | 59.7 | 26.4 | 36.6 | 59.9 | 27.1 | 37.4 |
TTD | 78.3 | 16.8 | 27.6 | 82.9 | 14.4 | 24.6 | 81.1 | 14.7 | 24.9 |
PubChem | 56.4 | 57.2 | 56.8 | 61.1 | 57.9 | 59.5 | 60.4 | 58.6 | 59.5 |
Jochem | 67.1 | 52.5 | 58.9 | 67.1 | 52.5 | 58.9 | 66.4 | 53.5 | 59.3 |
UMLS | 44.7 | 51.6 | 47.9 | 45.4 | 50.8 | 47.9 | 45.3 | 51.3 | 48.1 |
ChEBI Family | 29.4 | 16.3 | 21.0 | 29.4 | 16.3 | 21.0 | 29.4 | 16.4 | 21.1 |