From: CheS-Mapper 2.0 for visual validation of (Q)SAR models
New feature | |||||||
(a) | Sorting of compound/cluster list according to selected feature | ||||||
(b) | Highlighting two features simultaneously | ||||||
(c) | Computing embedding quality and distances | ||||||
(d) | Determination of common properties of compounds/clusters | ||||||
(e) | Compute mean SALI values to detect activity cliffs | ||||||
(f) | KNIME integration | ||||||
Dataset | Use case | (a) | (b) | (c) | (d) | (e) | (f) |
Caco-2 | Inspect (Q)SAR information using integrated features |
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Compare (Q)SAR models and validation methods |
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Cox-2 | Inspect (Q)SAR information by mining structural fragments |
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Inspect validation results with respect to activity cliffs |
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EPA FHM | Inspect applicability domain algorithms |
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CPDB Hamster | Compare modeling with different feature sets |
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(Provided in Additional file 2) |