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Fig. 4 | Journal of Cheminformatics

Fig. 4

From: Geomfinder: a multi-feature identifier of similar three-dimensional protein patterns: a ligand-independent approach

Fig. 4

Similarity of the sequence and the 3D patterns in the Monoamine Oxidase B proteins. The red bars represent the highest value of a GScore between each pair of 3D patterns related with MAO-B binding sites. The sequence similarity between each pair of MAO proteins is shown in the purple bars. The blue and green bars show the similarity measured by the PocketMatch and the Click software, respectively. All pair of MAO proteins evaluated together with the % of similarity of all methods, are described in the X axis. The protein sequences were obtained with the babel software, using as input the structures obtained from the PDB database

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