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Table 1 Evaluation of the ACR binding site similarities in 1AGM, 3AIC, 1ULV and 3WEM proteins

From: Geomfinder: a multi-feature identifier of similar three-dimensional protein patterns: a ligand-independent approach

ACR GScore Smith ProBIS MultiBind SiteEngine
Binding Site Geomfinder (%) Waterman Pairwise Server Server
Similarity   [48] (%) [25] [51] [52]
1AGM    Alig. Score 33,8856 4279,01
vs 34  32 −3,63 6 same AA 1 same AA
3AIC     of 19 of 13
1ULV     34,2356 4307,17
vs 25 39 Invalid 3 same AA 1 same AA
3WEM    PDB: 3WEM of 13 of 13