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Table 4 Frequency of structural alignment in 20 no homologous template chains with Chain Length Indexing involved

From: bSiteFinder, an improved protein-binding sites prediction server based on structural alignment: more accurate and less time-consuming

Query chain Query length Alignment frequency Percentage of sequences passed Chain Length Indexing (%) Query chain Query length Alignment frequency Percentage of sequences passed Chain Length Indexing (%)
4ggbA 348 39,458 38.9 1wakA 353 39,014 38.5
2yzvA 286 39,291 38.8 4ff5A 227 31,362 31.0
4iezA 186 22,882 22.6 4fk9A 314 40,446 39.9
3ii7A 288 39,614 39.1 1ujcA 156 17,109 16.9
3a3jA 344 39,782 39.3 3ianA 319 40,000 39.5
3chlA 315 40,325 39.8 3rloA 196 25,455 25.1
2cf5A 352 39,192 38.7 3mfcA 187 23,369 23.1
2iq1A 257 36,141 35.7 3dgtA 278 38,641 38.1
1wy0A 327 40,200 39.7 2dh6A 331 40,195 39.7
2y7bA 134 14,998 14.8 1w4sA 146 16,265 16.1