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Table 4 Frequency of structural alignment in 20 no homologous template chains with Chain Length Indexing involved

From: bSiteFinder, an improved protein-binding sites prediction server based on structural alignment: more accurate and less time-consuming

Query chain

Query length

Alignment frequency

Percentage of sequences passed Chain Length Indexing (%)

Query chain

Query length

Alignment frequency

Percentage of sequences passed Chain Length Indexing (%)

4ggbA

348

39,458

38.9

1wakA

353

39,014

38.5

2yzvA

286

39,291

38.8

4ff5A

227

31,362

31.0

4iezA

186

22,882

22.6

4fk9A

314

40,446

39.9

3ii7A

288

39,614

39.1

1ujcA

156

17,109

16.9

3a3jA

344

39,782

39.3

3ianA

319

40,000

39.5

3chlA

315

40,325

39.8

3rloA

196

25,455

25.1

2cf5A

352

39,192

38.7

3mfcA

187

23,369

23.1

2iq1A

257

36,141

35.7

3dgtA

278

38,641

38.1

1wy0A

327

40,200

39.7

2dh6A

331

40,195

39.7

2y7bA

134

14,998

14.8

1w4sA

146

16,265

16.1