Fig. 3
From: Ligand-based virtual screening interface between PyMOL and LiSiCA
Example of the plugin’s output after 3D screening, where two molecules are superimposed based on the atom pairs displayed on the left hand side list. Here, two comparable bromine atoms are selected. Color codes are the same as in Fig. 2. The Tanimoto coefficient and the molecule names were added for clarity and are not shown in the PyMOL viewer