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Table 3 Sensitivity, ω, calculated for each tool (MetFragCL, CFM-ID, MAGMa+ and MS-FINDER) based on the correctly assigned structures in the top rank, top 5, top 10 and top 20 using the training data set of 312 MS/MS spectra

From: Comprehensive comparison of in silico MS/MS fragmentation tools of the CASMI contest: database boosting is needed to achieve 93% accuracy

# Tools Top hits Top 5 Top 10 Top 20
1 MetFragCL in silico only 0.1666 0.4294 0.548 0.673
2 MAGMa+ in silico only 0.1602 0.3878 0.4839 0.6057
3 CFM-ID in silico only 0.1538 0.3974 0.5448 0.6698
4 MS-FINDER in silico only 0.10256 0.27564 0.3750 0.4647
  1. The sensitivity was calculated as follows: ω = true positive/(true positive + false negative). The calculated sensitivities were used on the challenge data set