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Table 2 Comparison of technical features

From: Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

  Approach Interface Availability Input file formats Output file formats
RDT Structure-based Web and desktop application Free RXN, SMILES RXN, SMILES
DREAM Optimisation-based Web application Free RXN, SMILES RXN
MWED Optimisation-based Desktop application Free for academics RXN, SMILES SMILES, MetaCyc
CLCA Structure-based Algorithm Free SMILES SMILES
ICMAP Structure-based Desktop application Commercial RXN RXN
AutoMapper Structure-based Desktop application Free for academics RXN, SMILES RXN, SMILES