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Table 1 Compatibility tests

From: Scoria: a Python module for manipulating 3D molecular data

OS

Python

NumPy

SciPy

MDAnalysis

macOS Sierra (10.12.3)

Python 2.7.13/Anaconda 4.2.13

1.11.2

0.18.1

0.15.0

macOS Sierra (10.12.3)

PyPy 1.8.0

N/A

N/A

N/A

Ubuntu 16.04.1 LTS

Python 2.7.13/Anaconda 4.3.14

1.11.3

0.18.1

0.15.0

Windows 10 Pro Version 1607

Python 2.7.13/Anaconda 4.3.14

1.11.3

0.18.1

N/A

Ubuntu 16.04.1 LTS

Python 3.6.0/Anaconda 4.3.14

1.11.3

0.18.1

N/A

  1. We tested Scoria’s basic functionality on macOS 10, Ubuntu Linux, and Windows 10, using Python 2.7, Python 3.6, and PyPy 1.8. PyPy does not support NumPy, SciPy, or MDAnalysis; MDAnalysis does not support Windows; and MDAnalysis was error prone when installed under Python 3. These limitations did not prevent Scoria from passing all basic-functionality tests, though it ran slower