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Table 5 Summary of the classifier models that have been used in the two phases of the virtual screening experiment

From: Spectrophores as one-dimensional descriptors calculated from three-dimensional atomic properties: applications ranging from scaffold hopping to multi-target virtual screening

Phase

Classifier with parametersa

Precision ± SDb

Phase 1 (binary classification)

Soft voting classifier with 2 underlying models:

Random forest classifier:

 criterion = ‘entropy’; max_features = ‘log2’; n_estimators = 30 

k-nearest neighbors classifier:

 n_neighbors = 28; weights = ‘uniform’

0.80 ± 0.07

Phase 2 (multiclass)

Extra Trees classifier:

 max_features = None; criterion = ‘gini’; n_estimators = 90; min_samples_leaf = 1

0.63 ± 0.01

  1. aParameters as implemented in the scikit-learn package
  2. bMean and standard deviation calculated from tenfold cross-validation