Name | Year | Type | Web server | Stand-alone | Fully automated†| Source Code |
---|---|---|---|---|---|---|
SiteMap [35] | 2009 | Geometric | – | Yes | Yes | – |
Fpocket [18] | 2009 | Geometric | Yes | Yes | Yes | Yes |
SiteHound [28] | 2009 | Energetic | Yes | Yes | Yes | Yes |
ConCavity [36] | 2009 | Conservation | Yes | Yes | – | Yes |
3DLigandSite [37] | 2010 | Template | Yes | – | – | – |
POCASA [38] | 2010 | Geometric | Yes | – | – | – |
DoGSite [39] | 2010 | Geometric | Yes | – | – | – |
MetaPocket 2.0 [27] | 2011 | consensus | Yes | – | – | – |
MSPocket [81] | 2011 | Geometric | – | Yes | Yes | Yes |
FTSite [40] | 2012 | Energetic | Yes | – | – | – |
LISE [41] | 2012 | Knowledge/conservation | Yes | Yes | – | – |
COFACTOR [42] | 2012 | Template | Yes | Yes | Yes | – |
COACH [43] | 2013 | Template††| Yes | Yes | Yes | – |
G-LoSA [44] | 2013 | Template | – | Yes | – | Yes |
eFindSite [45] | 2013 | Template | Yes | Yes | – | Yes |
GalaxySite [46] | 2014 | Template/docking | Yes | – | – | – |
LIBRA [47] | 2015 | Template | Yes | Yes | – | – |
P2Rank (this work) | 2015* | Machine learning | –** | Yes | Yes | Yes |
bSiteFinder [48] | 2016 | Template | Yes | – | – | – |
ISMBLab-LIG [32] | 2016 | Machine learning | Yes | – | – | – |
DeepSite [33] | 2017 | Machine learning | Yes | – | – | – |