From: Probing the chemical–biological relationship space with the Drug Target Explorer
Drug–Target Explorer | Probe Miner | DGIdb v3.0 | DT-Web | BindingDB | Probes and Drugs | Polypharmacology Browser | STITCH | ChEMBLSpace | Carlsbad | SuperTarget | |
---|---|---|---|---|---|---|---|---|---|---|---|
Web app? | X | X | X | X | X | X | X | X | X | X | |
Open-source software? | X | X | X—underlying R package only | Unknown | X | X | |||||
Search by targets to find drugs? | X | X | X | X | X | X | X—only by PDB-listed ligands | X | X | X | X |
Search by drugs to find targets? | X | X | X | X | X | X | X | X | X | ||
Identification of molecules that are associated with multiple query targets? | X | Unknown | X | ||||||||
Drug structure input? | X | X | X | X | X | X | |||||
Drug name/ID input? | X | X | X | X | X | X | X | X | X | ||
Visualize drug–target networks? | X | X, with user provided drug–target networks | Unknown | X | X | ||||||
Identify chemically similar drugs? | X | X, with user provided drug–target networks | X | Scaffold search | X | X | X | X | |||
Allows queries using molecules not in database? | X | X, with user provided drug–target networks | X | X | X | X | |||||
Target organism? | Human | Human | Human | Human | Human and others | Human and others | Human and others | Human and others | Unknown | Human and others | Human and others |
Target space? | 3.6 k | 2.2 k | 6.1 k | 3.8 k | > 7 k | > 6 k | 4.6 k | 9.6 mil | Unknown | 3.7 k | > 6 k |
Chemical space? | 280 k | 400 k | 10 k | 4.4 k | > 642 k | > 43 k | 870 k | 500 k | Unknown | > 435 k | > 196 k |
Quantitative interactions? | X | X | Unknown | X | X | X | X | X | X | X | |
Qualitative interaction? | X | X | X | X | X | Unknown | X | ||||
Explore polypharmacology? | X | X | X | X | X | X | X | X | X | X | X |
Polypharmacologic target enrichment? | X | X | X | X | |||||||
Comparison of query molecule to HTS drug response datasets? | X | ||||||||||
Target prediction? | X | X | X | ||||||||
Database access? | Open | Open | Open | Open | Open | Open | Open | Full database requires license | Unknown | Open | Unknown |
Last known update | 2018 | 2018 | 2018 | 2018 | 2018 | 2018 | 2016 | 2016 | 2015 | 2014 | 2012 |