Table 2 Data sources and statistics collected in CSgator
From: CSgator: an integrated web platform for compound set analysis
Number of entries | Number of compounds | Sources | Number of relations | Standard ID | |
|---|---|---|---|---|---|
Compound database | |||||
Compound | – | 89,602,599 | PubChem, ChEMBL, ChEBI, DrugBank | – | InChIKey |
Compound-target & disease & bioassay | |||||
Target | 252,498 | 852,375 | 15 Public DBs | 6,027,120 | Entrez Gene ID & UniProtKB |
Disease | 5680 | 10,975 | CTD | 1,575,457 | MeSH & OMIM |
Bioassay | 1,218,658 | 2,253,835 | PubChem, ChEMBL | 229,842,265 | PubChem AID & ChEMBL |
Classification | |||||
Protein family | 575 | 833,590 | ChEMBL 21 | 1,691,879 | ChEMBL protein class |
GO term | 19,234 | 851,359 | Gene Ontology | 68,331,986 | GO term |
Disease ontology | 1824 | 5429 | Disease Ontology | 46,053 | DO term |
MeSH disease | 6351 | 6909 | NIH | 143,277 | MeSH |
Approval status | 9 | 3765 | DrugBank ChEMBL NCGC | 12,820 | InChIKey |