Table 3 Descriptive statistics of the relative deviation of the CSM resulting from a greedy algorithm of the atoms as compared with the Hungarian algorithm
From: Improved algorithms for quantifying the near symmetry of proteins: complete side chains analysis
Set | CSM | N | Mean (%) | Standard deviation (%) | SE of mean (%) | Minimum (%) | Median (%) | Maximum (%) |
|---|---|---|---|---|---|---|---|---|
Dimers | S(C2) | 194 | 1.5 | 1.3 | 0.1 | 0.0 | 1.2 | 7.1 |
Trimers | S(C3) | 214 | 1.5 | 1.1 | 0.1 | 0.0 | 1.3 | 5.6 |
Tetramers | S(C2) | 31 | 2.0 | 1.9 | 0.3 | 0.0 | 1.7 | 6.8 |
| Â | S(C4) | 31 | 1.1 | 1.0 | 0.2 | 0.0 | 1.0 | 3.3 |
Pentamers | S(C5) | 51 | 2.1 | 1.9 | 0.3 | 0.0 | 1.6 | 9.8 |
Hexamers | S(C2) | 16 | 2.9 | 2.1 | 0.5 | 0.5 | 2.2 | 7.9 |
| Â | S(C3) | 16 | 1.6 | 1.2 | 0.3 | 0.3 | 1.3 | 3.9 |
| Â | S(C6) | 16 | 2.5 | 1.6 | 0.4 | 0.0 | 2.6 | 5.1 |