Table 3 TIPS teams—annotation server overview

103

SIA*

Philippe Thomas

German Research Center for Artificial Intelligence

JSON

Germany

Java

Apache License 2

[37, 38]

106

LeadMine WS

Daniel Lowe

NextMove Software

JSON

Ireland

Java

–

–

107

SCHEMA

Hong-Jie Dai

National Taitung University

JSON

Republic of China (Taiwan)

C#

–

[39]

108

MRI

Chen-Kai Wang

Taipei Medical University

JSON

Republic of China (Taiwan)

C#

–

[40]

111

DiseaseExtract

Jitendra Jonnagaddala

UNSW Australia

JSON

Australia

Java

Apache License 2

[41]

114

Tagger*

Lars Juhl Jensen

University of Copenhagen

JSON/TSV

Denmark

C++

The BSD 2-Clause ‘Simplified’ or ‘FreeBSD’ License

[42, 43]

116

Neji—BeCalm TIPS Task*

André Santos

IEETA—Institute of Electronics and Informatics Engineering of Aveiro

ALL

Portugal

Java

CC by-nc-sa 3.0

[44, 45]

117

MER*

André Lamúrias

LaSIGE, Faculdade de Ciências, Universidade de Lisboa, Portugal

TSV

Portugal

Bash

MIT

[46, 47]

120

Olelo

Hendrik Folkerts

Hasso Plattner Institute

BioC

Germany

Java

–

[48]

121

LeadMine WS (AWS Free Tier)

Daniel Lowe

NextMove Software

JSON

United States of America

Java

–

–

122

OntoGene*

Lenz Furrer

Institute for Computational Linguistics, University of Zurich

BioC, JSON, TSV

Switzerland

Python

GNU Affero General Public License

[49, 50]

124

TextImager CempS

Wahed Hemati

Text Technology Lab—Goethe-Universität Frankfurt

TSV

Germany

Java

–

[51]

126

TextImager GproM

Wahed Hemati

Text Technology Lab - Goethe-Universität Frankfurt

TSV

Germany

Java

–

[51]

127

READ-Biomed

Read Biomed

University of Melbourne

JSON

Australia

Java/Scala

–

[52]

128

NLProt

Miguel Madrid

Structural Computational Biology Group of the CNIO

JSON

Spain

Crystal

MIT

[53]