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Table 2 Comparison of \(SC_4\)’s performance obtained by different methods in Mol2vec and ProtVec

From: Multi-channel PINN: investigating scalable and transferable neural networks for drug discovery

Mol2vec

ProtVec

MCC

ROC

Mean

Sum

0.652 (± 0.004)

0.905 (± 0.002)

Mean

Mean

0.648 (± 0.003)

0.902 (± 0.003)

Mean

TF-IDF

0.678 (± 0.002)

0.912 (± 0.002)

TF-IDF

Sum

0.651 (± 0.003)

0.904 (± 0.003)

TF-IDF

Mean

0.644 (± 0.002)

0.901 (± 0.002)

TF-IDF

TF-IDF

0.674 (± 0.004)

0.905 (± 0.002)

Sum

Sum

0.642 (± 0.005)

0.900 (± 0.003)

Sum

Mean

0.636 (± 0.003)

0.898 (± 0.003)

Sum

TF-IDF

0.668 (± 0.002)

0.911 (± 0.002)