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Table 2 Comparison of \(SC_4\)’s performance obtained by different methods in Mol2vec and ProtVec

From: Multi-channel PINN: investigating scalable and transferable neural networks for drug discovery

Mol2vec ProtVec MCC ROC
Mean Sum 0.652 (± 0.004) 0.905 (± 0.002)
Mean Mean 0.648 (± 0.003) 0.902 (± 0.003)
Mean TF-IDF 0.678 (± 0.002) 0.912 (± 0.002)
TF-IDF Sum 0.651 (± 0.003) 0.904 (± 0.003)
TF-IDF Mean 0.644 (± 0.002) 0.901 (± 0.002)
TF-IDF TF-IDF 0.674 (± 0.004) 0.905 (± 0.002)
Sum Sum 0.642 (± 0.005) 0.900 (± 0.003)
Sum Mean 0.636 (± 0.003) 0.898 (± 0.003)
Sum TF-IDF 0.668 (± 0.002) 0.911 (± 0.002)