Fig. 6
From: EDock: blind protein–ligand docking by replica-exchange monte carlo simulation
Example of successful docking on 1lloA_BS01_UUU. The center of the binding site prediction (yellow) is 8.21 Å away from the center of the native ligand (red), where graph matching detects a pose (cyan) with an RMSD of 2.12 Å. EDock constructs the final model (green) with an RMSD of 0.27 Å through REMC refinement