Skip to main content

Table 1 Public databases and datasets from which COCONUT was assembled

From: COCONUT online: Collection of Open Natural Products database

Database name ("NP" suffix is added to database name when only a subset of it contains natural products)

Number of entries integrated in COCONUT from the source

Most resent publication or resource URL

AfroCancer

365

[33]

AfroDB

874

[34]

AfroMalariaDB

252

[35]

AnalytiCon Discovery NPs

4908

[36]

BIOFACQUIM

400

[37]

BitterDB

625

[38]

Carotenoids Database

986

[39]

ChEBI NPs

14603

[20]

ChEMBL NPs

1585

[21]

ChemSpider NPs

9027

[40]

CMAUP (cCollective molecular activities of useful plants)

20868

[7]

ConMedNP

2504

[41]

ETM (Ethiopian Traditional Medicine) DB

1633

[42]

Exposome-explorer

478

[43]

FooDB

22123

[9]

GNPS (Global Natural Products Social Molecular Networking)

6740

[44]

HIM (Herbal Ingredients in-vivo Metabolism database)

962

[45]

HIT (Herbal Ingredients Targets)

470

[46]

Indofine Chemical Company

46

[47]

InflamNat

536

[48]

InPACdb

122

[49]

InterBioScreen Ltd

67291

[50]

KNApSaCK

44422

[6]

Lichen Database

1453

[51]

Marine Natural Products

11880

[52]

Mitishamba database

1010

[53]

NANPDB (Natural Products from Northern African Sources)

3914

[54]

NCI DTP data

404

[55]

NPACT

1453

[56]

NPASS

27424

[57]

NPAtlas

23914

[4]

NPCARE

1362

[58]

NPEdia

16166

[59]

NuBBEDB

2022

[5]

p-ANAPL

467

[60]

Phenol-explorer

681

[61]

PubChem NPs

2828

[27]

ReSpect

699

[62]

SANCDB

592

[63]

Seaweed Metabolite Database (SWMD)

348

[64]

Specs Natural Products

745

[65]

Spektraris NMR

242

[66]

StreptomeDB

6058

[67]

Super Natural II

214420

[3]

TCMDB@Taiwan (Traditional Chinese Medicine database)

50862

[8]

TCMID (Traditional Chinese Medicine Integrated Database)

10552

[68]

TIPdb (database of Taiwan indigenous plants)

7742

[69]

TPPT (Toxic Plants–PhytoToxins)

1483

[70]

UEFS (Natural Products Databse of the UEFS)

481

[71]

UNPD (Universal Natural Products Database)

156865

[72]

VietHerb

4759

[73]

ZINC NP

67327

[74]

Manually selected molecules

61

x