TY - JOUR AU - O’Boyle, N. M. AU - Guha, R. AU - Willighagen, E. L. PY - 2011 DA - 2011// TI - Open data, open source and open standards in chemistry: the blue obelisk five years on JO - J Cheminform VL - 3 UR - https://doi.org/10.1186/1758-2946-3-1 DO - 10.1186/1758-2946-3-1 ID - O’Boyle2011 ER - TY - JOUR AU - Swain, M. C. AU - Cole, J. M. PY - 2016 DA - 2016// TI - ChemDataExtractor: a toolkit for automated extraction of chemical information from the scientific literature JO - J Chem Inf Model VL - 56 UR - https://doi.org/10.1021/acs.jcim.6b00207 DO - 10.1021/acs.jcim.6b00207 ID - Swain2016 ER - TY - JOUR AU - Krallinger, M. AU - Rabal, O. AU - Lourenço, A. AU - Oyarzabal, J. AU - Valencia, A. PY - 2017 DA - 2017// TI - Information retrieval and text mining technologies for chemistry JO - Chem Rev VL - 117 UR - https://doi.org/10.1021/acs.chemrev.6b00851 DO - 10.1021/acs.chemrev.6b00851 ID - Krallinger2017 ER - TY - JOUR AU - Rajan, K. AU - Brinkhaus, H. O. AU - Zielesny, A. AU - Steinbeck, C. PY - 2020 DA - 2020// TI - A review of optical chemical structure recognition tools JO - J Cheminform UR - https://doi.org/10.1186/s13321-020-00465-0 DO - 10.1186/s13321-020-00465-0 ID - Rajan2020 ER - TY - JOUR AU - Filippov, I. V. AU - Nicklaus, M. C. PY - 2009 DA - 2009// TI - Optical structure recognition software to recover chemical information: OSRA, an open source solution JO - J Chem Inf Model VL - 49 UR - https://doi.org/10.1021/ci800067r DO - 10.1021/ci800067r ID - Filippov2009 ER - TY - JOUR AU - Beard, E. J. AU - Cole, J. M. PY - 2020 DA - 2020// TI - ChemSchematicResolver: a toolkit to decode 2d chemical diagrams with labels and r-groups into annotated chemical named entities JO - J Chem Inf Model VL - 60 UR - https://doi.org/10.1021/acs.jcim.0c00042 DO - 10.1021/acs.jcim.0c00042 ID - Beard2020 ER - TY - JOUR AU - Staker, J. AU - Marshall, K. AU - Abel, R. AU - McQuaw, C. M. PY - 2019 DA - 2019// TI - Molecular Structure extraction from documents using deep learning JO - J Chem Inf Model VL - 59 UR - https://doi.org/10.1021/acs.jcim.8b00669 DO - 10.1021/acs.jcim.8b00669 ID - Staker2019 ER - TY - STD TI - Ronneberger O, Fischer P, Brox T (2015) U-net: convolutional networks for biomedical image segmentation. Lecture notes in computer science, p 234–241 ID - ref8 ER - TY - JOUR AU - Rajan, K. AU - Zielesny, A. AU - Steinbeck, C. PY - 2020 DA - 2020// TI - DECIMER: towards deep learning for chemical image recognition JO - J Cheminform VL - 12 UR - https://doi.org/10.1186/s13321-020-00469-w DO - 10.1186/s13321-020-00469-w ID - Rajan2020 ER - TY - STD TI - Abadi M, Agarwal A, Barham P, et al (2016) TensorFlow: large-scale machine learning on heterogeneous distributed systems. arXiv:1603.04467 [cs.DC] ID - ref10 ER - TY - STD TI - He K, Gkioxari G, Dollár P, Girshick R (2017) Mask r-cnn. In: Proceedings of the IEEE international conference on computer vision, p 2961–2969 ID - ref11 ER - TY - STD TI - Abdulla W (2017) Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow. https://github.com/matterport/Mask_RCNN. Accessed 1 Dec 2020 UR - https://github.com/matterport/Mask_RCNN ID - ref12 ER - TY - STD TI - Belval E. pdf2image. https://github.com/Belval/pdf2image. Accessed 9 Dec 2020 UR - https://github.com/Belval/pdf2image ID - ref13 ER - TY - STD TI - Dutta A, Zisserman A (2019) The VIA annotation software for images, audio and video. In: Proceedings of the 27th ACM international conference on multimedia. Association for Computing Machinery, New York, NY, p 2276–2279 ID - ref14 ER -