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Table 7 The scaffold analysis results of the substrate and inhibitor datasets

From: Machine learning to predict metabolic drug interactions related to cytochrome P450 isozymes

Subsets

Number of scaffolds

Number of carbons

Most prominent scaffolds

(Murcko Class)

Common scaffolds

1A2

Inhibitor

Positive

3520

1418

1526, 3567, 3606

4, 1, 168

Negative

4257

2090

54, 7220, 5, 414, 849

Substrate

Positive

150

94

36, 8, 14

3, 56

Negative

163

113

158, 43

2C9

Inhibitor

Positive

3088

1708

4866, 4863, 4885

4, 3366, 179

Negative

4353

1793

59, 3303, 3413

Substrate

Positive

168

119

66, 36, 70

19

Negative

166

123

173, 199, 254

2C19

Inhibitor

Positive

4189

2015

3756, 188, 349, 5176

4, 6, 39

Negative

3751

1614

3567, 461, 3570, 7237

Substrate

Positive

132

89

7, 31, 63

47, 16

Negative

137

105

93

2D6

Inhibitor

Positive

1836

1003

74, 3742, 3904, 3911

4, 36, 1655

Negative

6244

2580

3718, 3744, 56

Substrate

Positive

209

150

40, 42, 45

1, 26

Negative

223

153

212, 62, 38

3A4

Inhibitor

Positive

3536

1912

3504, 3539, 3592

4, 3576, 168

Negative

4227

1630

58, 429, 7136

Substrate

Positive

518

385

57, 31, 80

38, 8, 60

Negative

506

301

541, 530, 533, 105, 631