Table 3 The average accuracy and success rate of MODPEP2.0 with different sequence identity cutoffs between the modeled peptide and the cyclic backbone library when an ensemble of 100 conformations were considered for a peptide
From: Efficient 3D conformer generation of cyclic peptides formed by a disulfide bond
| Â | Sequence identity cutoff (%) | ||||||
|---|---|---|---|---|---|---|---|
| Â | 100 | 90 | 80 | 70 | 60 | 50 | 40 |
cRMSD (Ã…) | 1.66 | 1.70 | 1.74 | 1.87 | 1.92 | 1.99 | 2.09 |
Success Rate (%) | 81.35 | 79.79 | 79.79 | 78.76 | 76.68 | 74.35 | 74.32 |