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Fig. 2 | Journal of Cheminformatics

Fig. 2

From: How to approach machine learning-based prediction of drug/compound–target interactions

Fig. 2

t-SNE based visualization of conventional (apaac, k-sep_pssm, pfam, taap) and learned (protvec, seqvec, transformer-avg, unirep1900) protein representations on; (a) enzymes including hydrolases, oxidoreductases, proteases, transferases, and other-enzymes groups, and (b) non-enzyme protein families including epigenetic regulators, ion channels, membrane receptors, transcription factors, and transporters, in different colors

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