bSiteFinder, an improved protein-binding sites prediction server based on structural alignment: more accurate and less time-consuming

Table 3 Frequency of structural alignment with 48 unbound chains using Homology Indexing

PDB ID CHAIN ID	Alignment frequency	PDB ID CHAIN ID	Alignment frequency	PDB ID CHAIN ID	Alignment frequency	PDB ID CHAIN ID	Alignment frequency
3tmsA	535	1ifbA	171	1cgeA	273	1bbsA	747
8adhA	424	3ptnA	1181	1hsiB	1203	1stnA	144
1hxfH	1326	1ypiA	170	1a4jB	489	1ptsA	268
2fbpA	269	5dfrA	463	1imeA	173	2ctbA	106
1gcgA	169	3phvA	1153	1nnaA	416	2cbaA	522
1helA	203	2ctvA	625	1ahcA	188	1krnA	6
1npcA	154	5cpaA	106	2tgaA	1176	2silA	377
1esaA	1246	1a6uH	397	4ca2A	523	1l3fE	156
1brqA	344	1qifA	567	1pdyA	56	1chgA	1160
8ratA	173	3appA	753	1phcA	873	6insE	124
1swbA	269	1djbA	620	1psnA	744	3p2pA	209
1ulaA	724	1byaA	78	3lckA	3131	7ratA	167

ISSN: 1758-2946