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Table 2 Details of the three case studies representing the diversity of coordinate molecular data in supplementary material handled by ChemEngine

From: ChemEngine: harvesting 3D chemical structures of supplementary data from PDF files

Entry

Case study

N = molecules

Regular expression pattern

Format and delimiter

1

Epoxide formation from sulfur ylides and aldehydes

29

^[A-Za-z0-9]{1,2}\\s+-{0,1}.{1,2}[0-9]{1,8}\\s+-{0,1}.{1,2}[0-9]{1,8}.{1,}

PDF

Space

2

Thiol ene click chemistry

115

^[A-Za-z0-9]{1,2}\\s+-{0,1}.{1,2}[0-9]{1,8}\\s+-{0,1}.{1,2}[0-9]{1,8}.{1,}

Text

Space

3

Design of tetra(arenediyl)bis(allyl) derivatives for cope rearrangement transition states

55

^[A-Za-z0-9]{1,2}\\,[0]{0,1}[\\,]{0,1}-{0,1}.{1,2}[0-9]{1,10}\\,-{0,1}.{1,2}[0-9]{1,10}.{1,}

PDF

Comma