Table 1 Summary of corpora annotated with relations relevant to PV
From: Annotation and detection of drug effects in text for pharmacovigilance
References | Text type | Corpus size | Relation type | No of relations |
|---|---|---|---|---|
Gurulingappa et al. [43] | MEDLINE case reports | 2972 documents | Adverse drug reaction | 6821 |
Rosario and Hearst [60] | MEDLINE abstracts | 100 titles and 40 abstracts | Disorder-treatment | 1724 |
Van Mulligen et al. [61] | MEDLINE abstracts | 100 abstracts | Disorder-treatment | 668 |
Uzuner et al. [40] | Clinical discharge summaries/progress notes | 477 reports | Disorder-treatment | 3462 |
Roberts et al. [62] | Clinical documents (clinic letters, radiology, and histopathology reports) | 150 documents | Disorder-treatment | 227 |
Oronoz et al. [63] | Clinical discharge reports (Spanish) | 75 reports | Adverse drug reactions | 162 |
Patki et al. [64] | Social media | 10,616 user comments from DailyStrength | Adverse drug reactions | 2513 |
Ginn et al. [65] | Social media | 10,822 Tweets | Adverse drug reactions | 1436 |
Li et al. [55] | PubMed articles | 1500 articles | Chemical-disorder relations | 3116 |
Boyce et al. [46] | Drug package inserts | 64 inserts | Drug–drug interactions | 592 |
Rubrichi and Quaglini [49] | Summaries of product characteristics (Italian) | 100 sections on drug-related interactions | Drug–drug interactions | 2862 |
Segura-Bedmar et al. [66] | Free text documents from DrugBank | 579 documents | Drug–drug interactions | 3160 |
Herrero-Zazo et al. [50] | Free text documents from DrugBank and MEDLINE abstracts | 792 DrugBank documents/233 MEDLINE abstracts | Drug–drug interactions | 5028 |