Table 2 Comparison between MER and BioPortal on the HPO gold-standard corpus
From: MER: a shell script and annotation server for minimal named entity recognition and linking
| Â | NER | NER+NEL | ART | MTSA | ||||
|---|---|---|---|---|---|---|---|---|
| Â | P | R | F | P | R | F | ||
BioPortal | 0.6862 | 0.4463 | 0.5408 | 0.6118 | 0.3979 | 0.4822 | 1.15E+00 s | 1.45E−01 s |
MER | 0.7184 | 0.4514 | 0.5544 | 0.6155 | 0.3868 | 0.4751 | 7.32E−01 s | 9.59E−02 s |