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Table 2 Evaluation at the level of NER

From: OGER++: hybrid multi-type entity recognition

Entity type

Precision

Recall

F1

 

OG

OG + Dist

OG + Joint

OG

OG + Dist

OG + Joint

OG

OG + Dist

OG + Joint

All

0.44

0.88

0.800

0.62

0.58

0.645

0.51

0.70

0.714

Chemicals

0.44

0.89

0.870

0.73

0.68

0.726

0.55

0.77

0.792

Cells

0.88

0.88

0.738

0.77

0.67

0.748

0.80

0.76

0.743

BPMFs

0.39

0.78

0.628

0.25

0.22

0.349

0.30

0.35

0.449

Cellular components

0.51

0.91

0.867

0.60

0.56

0.658

0.55

0.70

0.748

Organisms

0.29

0.98

0.977

0.92

0.91

0.920

0.44

0.94

0.948

Proteins

0.49

0.86

0.778

0.84

0.75

0.812

0.62

0.80

0.795

Sequences

0.46

0.89

0.833

0.67

0.64

0.670

0.54

0.75

0.743