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Fig. 5 | Journal of Cheminformatics

Fig. 5

From: spyrmsd: symmetry-corrected RMSD calculations in Python

Fig. 5

Comparison between symmetry-correction performed with the Hungarian method or leveraging graph isomorphisms. The Hungarian algorithm often results in artificially low RMSDs due to atom-atom assignments breaking the molecular connectivity. The green cross corresponds to the protein-ligand complex 1DRJ analysed in Fig. 2

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