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Table 4 Average percentage of indentified true pharmacophore centers in top scored atoms for the pharmacophore data set

From: Benchmarks for interpretation of QSAR models

Model

Top-2 (%)

Top-3 (%)

Top-5 (%)

GBM/AP

54

63

77

RF/AP

43

54

67

SVM/AP

30

41

63

GC

33

39

50