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Table 1 Journal of Cheminformatics articles in the first year of the pilot

From: Two years of explicit CiTO annotations

Type

Article

Intentions

%CiTO

Editorial

Adoption of the Citation Typing Ontology by the Journal of Cheminformatics [5]

cito:citesAsAuthority, cito:citesForInformation, cito:usesMethodIn

42%

Methodology

Predicting target profiles with confidence as a service using docking scores [14]

cito:agreesWith, cito:extends, cito:citesAsAuthority, cito:citesAsDataSource, cito:usesMethodIn

47%

Research article

Too sweet: cheminformatics for deglycosylation in natural products [15]

cito:citeAsAuthority, cito:citesForInformation, cito:usesDataFrom, cito:usesMethodIn

 

Educational

A ligand-based computational drug repurposing pipeline using KNIME and Programmatic Data Access: case studies for rare diseases and COVID-19 [16]

cito:agreesWith, cito:citesAsAuthority, cito:citesAsDataSource, cito:discusses, cito:usesDataFrom, cito:usesMethodIn

98%

Database

COCONUT online: Collection of Open Natural Products database [17]

cito:citesForInformation, cito:usesDataFrom, cito:usesMethodIn

41%

Editorial

What is the role of cheminformatics in a pandemic? [18]

cito:agreesWith, cito:citesAsAuthority, cito:citesAsDataSource, cito:citesForInformation, cito:citesAsPotentialSolution

91%

Research article

Empowering large chemical knowledge bases for exposomics: PubChemLite meets MetFrag [19]

cito:citesAsAuthority, cito:citesAsDataSource, cito:citesAsMetadataDocument, cito:discusses, cito:extends, cito:usesDataFrom, cito:usesMethodIn

100%

Software

IDSM ChemWebRDF: SPARQLing small-molecule datasets [20]

cito:citesAsAuthority, cito:citesAsRelated, cito:usesDataFrom, cito:usesMethodIn

97%

Letter to the Editor

FAIR chemical structures in the Journal of Cheminformatics [21]

cito:citesAsAuthority, cito:documents

100%

Letter Response

Reply to “FAIR chemical structure in the Journal of Cheminformatics” [22]

cito:agreesWith, cito:citesAsAuthority, cito:citesAsDataSource, cito:obtainsBackgroundFrom, cito:repliesTo

100%