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Table 1 Overview of the molecular keys used to characterize molecules and constrain molecular perturbation

From: A molecule perturbation software library and its application to study the effects of molecular design constraints

Molecular key

Key structure

Local atom key

(D, V, Z, Q, H)

Ring-aware atom key

(R, XR, NR, D, V, Z, Q, H)

Local bond key (LB)

(D1, V1, Z1, Q1, H1, D2, V2, Z2, Q2, H2, B)

Ring-aware bond key (RAB)

(R1, XR1, NR1, D1, V1, Z1, Q1, H1, R2, XR2, NR2, D2, V2, Z2, Q2, H2, B)

Local environment key

Hash ({LB1, LB2 … LBn})

Ring-aware environment key

Hash ({RAB1, RAB2 … RABn})