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  1. Recent years have seen an explosion in the availability of data in the chemistry domain. With this information explosion, however, retrieving relevant results from the available information, and organising those ...

    Authors: Janna Hastings, Despoina Magka, Colin Batchelor, Lian Duan, Robert Stevens, Marcus Ennis and Christoph Steinbeck
    Citation: Journal of Cheminformatics 2012 4:8
  2. Analyzing chemical datasets is a challenging task for scientific researchers in the field of chemoinformatics. It is important, yet difficult to understand the relationship between the structure of chemical co...

    Authors: Martin Gütlein, Andreas Karwath and Stefan Kramer
    Citation: Journal of Cheminformatics 2012 4:7
  3. One of the largest challenges in chemistry today remains that of efficiently mining through vast amounts of data in order to elucidate the chemical structure for an unknown compound. The elucidated candidate c...

    Authors: Arvin Moser, Mikhail E Elyashberg, Antony J Williams, Kirill A Blinov and Joseph C DiMartino
    Citation: Journal of Cheminformatics 2012 4:5
  4. The current chemical space of known small molecules is estimated to exceed 1060 structures. Though the largest physical compound repositories contain only a few tens of millions of unique compounds, virtual scree...

    Authors: Narender Singh, Hongmao Sun, Sidhartha Chaudhury, Mohamed Diwan M AbdulHameed, Anders Wallqvist and Gregory Tawa
    Citation: Journal of Cheminformatics 2012 4:4
  5. Representations of chemical datasets in spreadsheet format are important for ready data assimilation and manipulation. In addition to the normal spreadsheet facilities, chemical spreadsheets need to have visua...

    Authors: Kevin R Lawson and Jonty Lawson
    Citation: Journal of Cheminformatics 2012 4:3
  6. The mechanism of phospholipidosis is still not well understood. Numerous different mechanisms have been proposed, varying from direct inhibition of the breakdown of phospholipids to the binding of a drug compo...

    Authors: Robert Lowe, Hamse Y Mussa, Florian Nigsch, Robert C Glen and John BO Mitchell
    Citation: Journal of Cheminformatics 2012 4:2
  7. The use of SharePoint® collaboration software for content management has become a critical part of today's drug discovery process. SharePoint 2010 software has laid a foundation which enables researchers to colla...

    Authors: Kartik Tallapragada, Joseph Chewning, David Kombo and Beverly Ludwick
    Citation: Journal of Cheminformatics 2012 4:1
  8. The computational processing and analysis of small molecules is at heart of cheminformatics and structural bioinformatics and their application in e.g. metabolomics or drug discovery. Pipelining or workflow to...

    Authors: Andreas Truszkowski, Kalai Vanii Jayaseelan, Stefan Neumann, Egon L Willighagen, Achim Zielesny and Christoph Steinbeck
    Citation: Journal of Cheminformatics 2011 3:54
  9. In drug discovery, a positive Ames test for bacterial mutation presents a significant hurdle to advancing a drug to clinical trials. In a previous paper, we discussed success in predicting the genotoxicity of ...

    Authors: Patrick McCarren, Clayton Springer and Lewis Whitehead
    Citation: Journal of Cheminformatics 2011 3:51
  10. Quantitative structure-activity relationships (QSAR) analysis of peptides is helpful for designing various types of drugs such as kinase inhibitor or antigen. Capturing various properties of peptides is essent...

    Authors: Tsutomu Osoda and Satoru Miyano
    Citation: Journal of Cheminformatics 2011 3:50
  11. The concept of Open Bibliography in science, technology and medicine (STM) is introduced as a combination of Open Source tools, Open specifications and Open bibliographic data. An Openly searchable and navigab...

    Authors: Richard Jones, Mark MacGillivray, Peter Murray-Rust, Jim Pitman, Peter Sefton, Ben O'Steen and William Waites
    Citation: Journal of Cheminformatics 2011 3:47
  12. The advent of open access to peer reviewed scholarly literature in the biomedical sciences creates the opening to examine scholarship in general, and chemistry in particular, to see where and how novel forms o...

    Authors: John Wilbanks
    Citation: Journal of Cheminformatics 2011 3:36